Ensembl 83 is scheduled for December 2015 and includes: Updated gene sets and annotations Human: gene set updated to GENCODE 24, and new assembly patches (GRCh38.p5) Mouse: updated to GENCODE M8 annotation Rat: updated gene set, including manually annotated HAVANA Continue reading What’s coming in Ensembl release 83
What is new? Pairwise alignments for more than 50 plant genomes including potato and tomato, cacao and grape, and several Oryza sp Newly available genomes from INSDC into our ever expanding Protists and Fungi divisions Cross-references of genes in Fungi and Protists Continue reading Ensembl Genomes release 29 is out!
The second update of the GRCh37 archive site has now been released. Some of the data imports and updates for this release include: dbSNP144 human data including data from the Exome Aggregation Consortium (ExAC) Public HGMD data (version 2015.2) Phenotype Continue reading Second update of the Ensembl GRCh37 site
What’s new in e82: Ensembl mobile website Support of VEP Plugins through the web interface, script and REST Improved Variation tables RNASeq data set of Zebrafish developmental stages Marking a region on images LastZ replaced TBlat for pairwise alignments Ensembl mobile Continue reading Ensembl 82 has been released!
Please note that the archive website for Ensembl release 68 (Jul 2012) will be retired in September when version 82 is released. This is in accordance with our rolling retirement policy, whereby archives more than three years old are retired unless they include Continue reading Retirement of Ensembl archive 68
Ensembl 82 is scheduled for September 2015 and includes: Updated gene sets and annotations Human variation data updates to dbSNP (144) including variants from the Exome Aggregation Consortium (ExAC) Mouse: updated to GENCODE M7 annotation Zebrafish: RNASeq data from developmental stages Other Continue reading What’s coming in Ensembl release 82
What is new? Software update: now version 81 of the Ensembl project for all our 23,636 genomes from 4,991 species Annotation update: Schizosaccharomyces pombe genes based on version 53 of PomBase Chado MySQL databases for release 18 are no longer available Protein domains for Continue reading Ensembl Genomes release 28 is out!
What’s new in e81: Human: updated to GENCODE 23 including manually annotated HAVANA annotation, with the new assembly patches (GRCh38.p3) Mouse and zebrafish clone tracks New mouse regulatory build Transcript sequence markup Human gene set update and new assembly patches The Continue reading Ensembl 81 has been released!
Ensembl 81 is scheduled for July 2015. Highlights include: Updated gene sets and annotations Human: updated to GENCODE 23 including manually annotated HAVANA annotation, with the new assembly patches (GRCh38.p3) Mouse: updated to GENCODE M6 including HAVANA annotation with the Continue reading What’s coming in Ensembl release 81
Ensembl Variation recently incorporated the latest versions of the dbSNP and 1000 Genomes datasets. While we are able to import all of the variant loci from phase 3 of the 1000 Genomes project, the vast amount of genotype data (2500 Continue reading 1000 Genomes phase 3 frequencies, genotypes and LD data