In February we will have the following Ensembl workshops:

10 Feb: Browser workshop at the Institute for Animal Health in Pirbright
11 Feb: Browser workshop at the Institute of Molecular Genetics in Prague, Czech Republic
12 Feb: Developers workshop at the Institute of Molecular Genetics in Prague, Czech Republic
23 Feb: Ensembl module in the EBI Roadshow at the Cyprus Institute of Neurology & Genetics in Nicosia, Cyprus
24-25 Feb: Developers workshop at the e-Science Centre in Edinburgh
26 Feb: Browser workshop at the Institute for Animal Health in Compton

For details about these and other upcoming workshops, please have a look at the complete list of Ensembl training events.

Happy Holidays, and Happy New Year from Ensembl!

The new year will start with some workshops given by our Outreach team on how to use our new interface (and the data behind the scenes!). We hope you have had time to explore and learn the layout! Remember to send any questions to our helpdesk.

Upcoming workshops in January, 2009:

11 Jan Ensembl Demo at the PAG XVII conference, San Diego, CA, USA
13-14 Ensembl 2-day browser workshop at the Universidad de Chile, Santiago, Chile
15-16 Modules in the EBI Bioinformatics Roadshow, UCLA, USA
19-20 Modules in the EBI Bioinformatics Roadshow, City of Hope, USA
22-23 Modules in the EBI Bioinformatics Roadshow, UCSF, USA
24 Browser course in the Computational Biology Workshop, Sultan Qaboos University, Muscat, Oman
26 Browser course in the 9th BioSapiens European School of Bioinformatics, Brussels, Belgium

That’s all for now!

There are still a few more Ensembl training events before the end of the year.

Browser workshops:

UNAM, Mexico City, Mexico (1-2 Dec)
UNAM, Cuernavaca, Mexico (5 Dec) (+ departmental seminar 4 Dec)

Amsterdam, The Netherlands (19 Dec)

Developers workshop:

University of Cambridge, UK (1-3 Dec)

In addition, Ensembl will feature as part of the following courses:

Wellcome Trust Open Door Workshop ‘Working with the Human Genome Sequence’ (1-2 Dec, Hinxton, Cambridge, UK) and Genes en evolución, ecologia e conservación (8-9 Dec, La Paz, Baja California, Mexico)

For details of these workshops, please have a look at the complete list of Ensembl training events.

Ensembl is attending the 22nd International Mammalian Genome Conference taking place in Prague (Czech Republic) from 2-5 November 2008. This meeting starts with three bioinformatics workshops on Sunday (2nd November) at the Institute of Molecular Genetics (AS CR). One of these workshops will focus on Ensembl, discussing new developments and featuring a preview of our new interface. We will be starting a 9:00 (Seminar Room 3.102, in the third floor). You can download the workshop materials here (exercises and tutorials). As part of our commitment with the EURATools consortium, we’ll be focusing on rat genomics, but if you work with any other species annotated in Ensembl, you are welcome.
See you in Prague!

Only 3 continents to cover this time, but November will be even busier for the Ensembl trainers than October ….

Ensembl will feature as part of the following courses:

‘Computational & Comparative Genomics’ (5-11 Nov, Cold Spring Harbor Laboratory, New York, US)
Wellcome Trust Open Door Workshop ‘Working with the Human Genome Sequence (10-12 Nov, Wellcome Trust Genome Campus, Hinxton, UK)
Hands-on training at EBI ‘Programmatic access in Java: webservices & work flows’ (24-27 Nov, Wellcome Trust Genome Campus, Hinxton, UK)

Browser workshops will be given at the following locations:

Europe:
Prague, Czech Republic (2 Nov)
Madrid, Spain (5 Nov)
Newcastle, UK (13 Nov)
Cambridge, UK (13-14 Nov)
Naples, Italy (19 Nov)

North America:
Cambridge, Massachusetts, US (12 Nov & 14 Nov)
Boston, Massachusetts, US (13 Nov)

Asia:
Kuala Lumpur, Malaysia (24-25 Nov)
Sabah, Malaysia (27-28 Nov)

For details of these workshops, please have a look at the complete list of Ensembl training events.

The Ensembl team has been involved in several activities in Hyderabad (India) during the last few days, making the most of the latest HUGO’s 13th Human Genome (HGM2008).

A satellite workshop has been organised within the Open Door Workshop framework at the Centre for Cellular and Molecular Biology (CCMB). Over 40 scientists from different countries had the opportunity to learn about different resources freely available on the Internet, providing us with useful feedback.

Following our presence in the HGM2008 in the EBI booth we had the opportunity to make several contacts that hopefully should allow us to organise a series of workshops around India next year. If you were interested to know more about this, or query about possibilities to host one of our workshops, you can contact us.

Greetings from India भारत से नमस्ते

As usual October is a busy month for the Ensembl trainers with workshops on 4(!) different continents.

From 1-3 Oct Ensembl will feature in the Wellcome Trust Open Door Workshop “Working with the Human Genome Sequence” in Hyderabad, India, and from 6-8 Oct in the EBI hands-on workshop “A two-day dip into the EBI’s data resources: Understanding your data” in Hinxton, UK.

Upcoming browser workshops:
9-10 Oct: J. Craig Venter Institute, Rockville, MD, US
14 Oct: National Human Genome Research Institute (NHGRI), Bethesda, MD, US
15 Oct: National Human Genome Research Institute (NHGRI), Bethesda, MD, US
16-17 Oct: University of the Free State, Bloemfontein, South Africa
20-21 Oct: University of the Witwatersrand, Johannesburg, South Africa
22 Oct: University of Nottingham, Nottingham, UK
23-24 Oct: University of the Western Cape, Cape Town, South Africa
29-30 Oct: EBI Roadshow, Dublin, Ireland

If you want to know to which locations we are coming after October, then have a look at the complete list of all upcoming training events.

Considering hosting an Ensembl workshop yourself? Please contact Xose Fernandez.

After the Summer break we are getting up to speed again with our training events:

14-16 Sep: Ensembl User Meeting, Hinxton, UK

17-19 Sep: Browser workshops and presentations, Erasmus MC Molecular Medicine Postgraduate School, Rotterdam, The Netherlands

22 Sep: Browser workshop, VIB Flanders Interuniversity Institute of Biotechnology, Antwerp, Belgium

We also have a complete list of all upcoming training events for the coming months available. Are we not coming to a location close to you? Why not host then an Ensembl workshop yourself? For more details, please contact Xose Fernandez.

The Ensembl team has recently run a series of workshops in China:

  • In Shanghai we were at Tongji University for a workshop organised by the Shanghai Center for Bioinformation Technology, and
  • In Beijing, we were hosted by Professor Jingchu Luo from the Center of Bioinformatics at Peking University where we also delivered some lectures in the Applied Bioinformatics Course.
  • Following this experience and due to the success of the tour, we are planning to go back to China. So if you were interested in hosting a workshop or you have a collaboration with a Chinese group who might be interested in knowing more about Ensembl, please contact us to discuss dates. We are trying to coordinate our next trip with different hosts.

    The Ensembl Team

    Hello all,

    There are a few Ensembl training events taking place this summer:

    (2-day) Browser workshop in the Dept. of Genetics, University of Cambridge, UK (5-6 June)

    Module in a Wellcome Trust Mini-Open Door Workshop (ODW) for MalariaGEN in Hinxton, UK (20 June)

    Module in a Mini-ODW at the ICG in Berlin (12 July)

    Programmers’ group at the ISMB meeting in Toronto, Canada (19-23 July)

    As ever, email us with any questions (or comments).

    Best Wishes,
    Helpdesk