Ensembl 86 is scheduled for September 2016, highlights include: New mouse strains Annotated genome assemblies, variation data and comparative analyses of 16 different mouse strains will be included in Ensembl 86. Updated assemblies, gene sets and annotations Human: updated cDNA alignments and Continue reading What’s coming in Ensembl release 86
The CRISPR/Cas9 system has revolutionised scientific research over the last few years, offering an efficient method of genome editing. CRISPR/Cas9 utilises the cellular machinery used by bacteria to recognise and edit the DNA of invading viruses. It is formed of two key components: Continue reading Find predicted CRISPR sites using Ensembl
What’s New in e85: 30 new human epigenomes from the Roadmap Epigenomics Project Human and mouse: Updated GENCODE set; including manually annotated HAVANA annotation, and all CCDS genes Imported symbol names from the Vertebrate Gene Nomenclature Committee (VGNC) for Chimpanzee Improved Continue reading Ensembl 85 has been released!
Ensembl 85 is scheduled for July 2016, highlights include: Updated gene sets and annotations Human: updated to GENCODE release 25, new CCDS import Mouse: updated to GENCODE release M10, Rat: updated Ensembl/HAVANA gene set Vega 65 annotation added for human, mouse Continue reading What’s coming in Ensembl release 85
We have scheduled the next releases of Ensembl (Release 85) and Ensembl Genomes (Release 32) for July 2016. Details of the declared intentions will be announced nearer the time. Please contact the helpdesk if you have any questions or feedback.
What’s new in e84: Human: Incorporation of BLUEPRINT Epigenome data and methylation data Pairwise Linkage Disequilibrium (LD) calculation on LD variant page Track hub registry interface Transcript haplotype view Incorporation of BLUEPRINT Epigenome data BLUEPRINT is a large scale research Continue reading Ensembl 84 has been released!
Ensembl 83 is scheduled for December 2015 and includes: Updated gene sets and annotations Human: gene set updated to GENCODE 24, and new assembly patches (GRCh38.p5) Mouse: updated to GENCODE M8 annotation Rat: updated gene set, including manually annotated HAVANA Continue reading What’s coming in Ensembl release 83
The second update of the GRCh37 archive site has now been released. Some of the data imports and updates for this release include: dbSNP144 human data including data from the Exome Aggregation Consortium (ExAC) Public HGMD data (version 2015.2) Phenotype Continue reading Second update of the Ensembl GRCh37 site
What’s new in e82: Ensembl mobile website Support of VEP Plugins through the web interface, script and REST Improved Variation tables RNASeq data set of Zebrafish developmental stages Marking a region on images LastZ replaced TBlat for pairwise alignments Ensembl mobile Continue reading Ensembl 82 has been released!
Ensembl 82 is scheduled for September 2015 and includes: Updated gene sets and annotations Human variation data updates to dbSNP (144) including variants from the Exome Aggregation Consortium (ExAC) Mouse: updated to GENCODE M7 annotation Zebrafish: RNASeq data from developmental stages Other Continue reading What’s coming in Ensembl release 82