GFF3 and Sequence Ontology terms

GFF3 and Sequence Ontology terms

Since release 81, Ensembl has provided the gene annotations in GFF3 files alongside the already existing GTF ones. While GTF uses its own controlled vocabulary to classify features, GFF3 takes advantage of sequence ontology. In the initial release, we attempted Continue reading GFF3 and Sequence Ontology terms

GRCh38 Assembly Mapping – Updating Coordinates in the New Human Genome

GRCh38 Assembly Mapping - Updating Coordinates in the New Human Genome

As you may know, the new GRCh38 assembly for human was released in December 2013. This is a major update for Ensembl and will require months of hard work to provide high quality annotation for our users. Our goal is to Continue reading GRCh38 Assembly Mapping – Updating Coordinates in the New Human Genome