What is new? Molecular and biological information from PHI-base (version 4.0) for thousands of genes in Protists, Bacteria and Fungi that are involved in pathogen-host interactions Small non-coding RNA genes in the diatom Phaeodactylum tricornutum (Rogato et al. 2014) Software update: version 83 of the Ensembl Continue reading Ensembl Genomes release 30 is out!
What is new? Pairwise alignments for more than 50 plant genomes including potato and tomato, cacao and grape, and several Oryza sp Newly available genomes from INSDC into our ever expanding Protists and Fungi divisions Cross-references of genes in Fungi and Protists Continue reading Ensembl Genomes release 29 is out!
What is new? Software update: now version 81 of the Ensembl project for all our 23,636 genomes from 4,991 species Annotation update: Schizosaccharomyces pombe genes based on version 53 of PomBase Chado MySQL databases for release 18 are no longer available Protein domains for Continue reading Ensembl Genomes release 28 is out!
What is new? Expansion of Protists and Fungi with hundreds of annotated genomes Variation data for bread wheat, rice, Aedes aegypti, and Ixodes scapularis Whole genome alignments for O. longistaminata and T. cacao Non-coding RNA gene models in Bacteria New Continue reading Ensembl Genomes release 27 is out!
Highlights Updated names and descriptions for Strigamia maritima genes 777 new bacterial genomes (Ensembl Bacteria now contains 21,767genomes) Assemblies 2.40 and 2.50 of tomato available in Assembly Converter (to transfer genomic coordinates between assemblies) New variation data for the plant pathogens Verticillium dahliae (JR2 Continue reading Ensembl Genomes release 26 is out!
Are you looking for whole genomes, protein sequences, alignments or other genome-wide data from Ensembl? Look no further; our FTP site is the place for you: Download our data from the current release only (i.e. Ensembl 78) Download our data from current and previous Continue reading The Ensembl FTP site, a one-stop shop
Highlights New fruitfly assembly BDGP6 New bread wheat assembly, including the BAC assembly of chromosome 3B New variation datasets for barley New assemblies and gene annotation for two plant pathogens Sequences from RNAcentral against selected genomes Variation data in barley We’ve added Continue reading Ensembl Genomes release 25 is out!
We have just released the latest update of Ensembl Genomes. The highlights of our new release are: New Genomes Ensembl Metazoa Zootermopsis nevadensis Ensembl Bacteria 4,310 new genomes: 20,254 genomes in total, including bacteria and archaea New Data Ensembl Plants Barley Continue reading Ensembl Genomes release 24 is out!
Are you a rat person, i.e. do you work on rat? Are you joining the 9th Rat Genomics and Models conference in December? Could you spare another day after the meeting before heading back home? If so, this post is for Continue reading Extra extra extra: Ensembl workshop at the ‘Rat Genomics and models’ conference!
If you are working on large sets of genomic data or carrying out detailed and complex bioinformatic analyses, keep on reading. Do any of the following thoughts ring a bell for you? I’d love to fetch protein coding genes from Continue reading ‘Can I host an Ensembl API workshop’? Yes, you can!