Ensembl Genomes 35 is now live

We are pleased to announce that Ensembl Genomes 35 has now been released. New and updated genomic sequences are available in all EG sub-portals, while updated comparative peptide analyses have been performed for Fungi, Metazoa, Plants, and Protists: Ensembl Bacteria now incorporates 2460 new genomes, as Continue reading Ensembl Genomes 35 is now live

What’s coming in Ensembl release 89

We’re already gearing up for Ensembl 89, scheduled for May 2017. It’s a slimline release this time, with just a handful of highlights: Updated assemblies, gene sets and annotations Human: updated cDNA alignments Mouse: updated cDNA alignments and update to Ensembl-Havana GENCODE Continue reading What’s coming in Ensembl release 89

File Chameleon, easily transform Ensembl FTP files

File Chameleon, easily transform Ensembl FTP files

Transforming file formats has always been a troublesome issue in bioinformatics because of the numerous standards and slight eccentricities in formatting required by some software packages. How many times have you needed to transform chromosome names between 1,2,3 and chr1, Continue reading File Chameleon, easily transform Ensembl FTP files

Regulation FTP resources restructured in Ensembl 87

The Ensembl regulation resources FTP site saw a facelift in release 87. The directory structures have been modified to make it easier to find files- the file names have become more descriptive and we now also provide our data in a greater variety of Continue reading Regulation FTP resources restructured in Ensembl 87